Publications - Department of Neuroscience

1081. Neurons of the inferior olive respond to broad classes of sensory input while subject to homeostatic control

Ju C, Bosman LW, Hoogland TM, Velauthapillai A, Murugesan P, Warnaar P, Negrello M, De Zeeuw CI

in 2018

DOI: 10.1101/379149

1082. Potentiation of cerebellar Purkinje cells facilitates whisker reflex adaptation through increased simple spike activity

Romano V, De Propris L, Bosman LW, Warnaar P, ten Brinke MM, Lindeman S, Ju C, Velauthapillai A, Spanke J, Guerra EM, Hoogland TM, Negrello M, D'Angelo E, De Zeeuw CI

in 2018

DOI: 10.1101/335489

1083. Neurometric correlates of sensitive high-frequency sound amplitude modulation detection by mice

van den Berg MM, Busscher E, Borst JGG and Wong AB

in 2021

DOI: https://doi.org/10.1101/2021.11.02.466979

1084. NeuroGym: An open resource for developing and sharing neuroscience tasks

Manuel Molano-Mazon, Joao Barbosa, Jordi Pastor-Ciurana, Marta Fradera, Ru-yuan Zhang, Jeremy Forest, Jorge del Pozo Lerida, Li Ji-An, Christopher J Cueva, Jaime de la Rocha, Devika Narain, Guangyu Robert Yang

in 2021

DOI: 10.31234/osf.io/aqc9n

1085. The calyx of Held synapse. In: Synaptic mechanisms in the auditory system

Borst JGG, Rusu SI

in 2011

1086. Cerebellum and cerebellar connections. The Rat Nervous System.

Ruigrok T. J. H., Sillitoe E. V., Voogd J.

in 2015

1087. Sensorimotor control of standing balance

Forbes PA, Chen A, Blouin JS

in 2018

DOI: 10.1016/B978-0-444-63916-5.00004-5

1088. Measuring Cerebellar Processing and Sensorimotor Functions in Non-Human Primates

Nico A. Flierman, Eric Avila, Chris I. De Zeeuw, Aleksandra Badura

in 2022

DOI: 10.1007/978-1-0716-2026-7_14

1089. Questioning the Cerebellar Doctrine

Galliano, E. and De Zeeuw, C. I.

in 2014

DOI: 10.1016/B978-0-444-63356-9.00003-0

1090. A potential role for the cerebellar nuclei in absence seizures

Alva, P., Kros, L., Maex, R., De Zeeuw, C., Adams, R., Davey, N., Steuber, V., & Hoebeek, F.

in 22nd Annual Computational Neuroscience Meeting: CNS*2013. 2013

DOI: 10.1186/1471-2202-14-S1-P170

1091. Towards on-demand system reliability: software implemented fault tolerance and testing

Sourdis, I., Shafik, R. A., Strydis, C., Pnevmatikatos, D., Theodoropoulos, D., Pradhan, D. K., & Rauwerda, G.

in ETS Avignon 2013

1092. Attack-tree-based Threat Modeling of Medical Implants

Muhammad Ali Siddiqi, Robert M. Seepers, Mohammad Hamad, Vassilis Prevelakis and Christos Strydis

in PROOFS 2018. 7th International Workshop on Security Proofs for Embedded Systems 2018

DOI: https://doi.org/10.29007/8gxh PDF

1093. Towards High-Resolution functional Ultrasound (fUS) Imaging of the Murine Spinal Cord

Soloukey S., Harhangi B.S., Generowicz, B. S., Slenter J.P.H., de Zeeuw, C. I., Kruizinga P., Koekkoek, S. K. E.

in International Ultrasonics Symposium (IUS), IEEE 2019

DOI: 10.1109/ULTSYM.2019.8926243

1094. High Frequency Functional Ultrasound in Mice

S.K.E. Koekkoek , S. Soloukey Tbalvandany, B.S. Generowicz, W.S. van Hoogstraten, N.L. de Oude, H.J. Boele, C. Strydis, G. Leus, J.G. Bosch, A.F.W. van der Steen, C. I. de Zeeuw, and P. Kruizinga

in IEEE International Ultrasonics Symposium (IUS) 2018

DOI: 10.1109/ULTSYM.2018.8579865

1095. Efficient and Flexible Spatiotemporal Clutter Filtering of High Frame Rate Images Using Subspace Tracking

B.S. Generowicz, G. Leus , S. Soloukey Tbalvandany, W.S. Van Hoogstraten, C. Strydis, J.G. Bosch, A.F.W. Van Der Steen, C. I. de Zeeuw , S.K.E. Koekkoek, P. Kruizinga

in IEEE International Ultrasonics Symposium (IUS) 2018

DOI: 10.1109/ULTSYM.2018.8579775

1096. GPU Implementation of Neural-Network Simulations based on Adaptive-Exponential Models

A. Neofytou, G. Chatzikostantis, I Magkanaris, G. Smaragdos, C. Strydis, D. Soudris

in IEEE 19th International Conference on Bioinformatics and Bioengineering (BIBE) 2019

DOI: 10.1109/BIBE.2019.00067

1097. Improving the Simulation of Biologically Accurate Neural Networks Using Data Flow HLS Transformations on Heterogeneous SoC-FPGA Platforms

K. Alfaro-Badilla, A. Arroyo-Romero, C. Salazar-García, L.G.L. Vega, J. Espinoza-González, F. Hernández- Castro, A. Chacón-Rodríguez, G. Smaragdos, C. Strydis

in CARLA 2019: High Performance Computing 2019

DOI: 10.1007/978-3-030-41005-6_13

1098. Accelerating complex brain-model simulations

H.A. Du Nguyen, Z. Al-Ars, G. Smaragdos, C. Strydis

in Design, Automation & Test in Europe Conference & Exhibition (DATE) 2015

DOI: 10.7873/DATE.2015.0071

1099. Design techniques of future reliable SoCs

I. Sourdis and C. Strydis

in 2nd Mediterranean Conference on Embedded Computing (MECO) 2013

DOI: 10.1109/MECO.2013.6601392

1100. A Novel Target for Neuromodulation in Spinal Cord Injury: Dorsal Root Ganglion-Stimulation Can Evoke Weight-Bearing Motor Responses in Patients with Chronic Motor Complete Spinal Cord Injury

Sadaf Soloukey, Judith de Rooij, Rutger Osterthun, Judith Drenthen, Chris De Zeeuw, Frank Huygen, Biswadjiet Harhangi

in Journal of Neurosurgery Publishing Group (JNSPG) 2020

DOI: 10.3171/2020.4.JNS.AANS2020abstracts

1101. The Inferior Olive: All Ins and Outs, In Handbook of the Cerebellum and Cerebellar

De Gruijl, J. R., L. W. J. Bosman, C. De Zeeuw, and M. De Jeu

in 2012

1102. Gap Junctions and Neuronal Synchronization in the Olivocerebellar System, In Gap Junctions in the Brain: Physiological and Pathological Roles, edited by Ekrem Dere

Bazzigaluppi, P., S. C. Isenia, C. De Zeeuw, and M. De Jeu

in 2012

1103. Cerebellum and Precerebellar Nuclei, In The Human Nervous System, edited by JK Mai, G Paxinos and eds

Voogd, J., and TJH Ruigrok

in 2012,

1104. Cerebellar influences on descending spinal motor systems. In M. Manto, J. Gruol, N. Schmahmann, N. Koibuchi & F. Rossi (Eds.), Handbook of the cerebellum and cerebellum disorders

Ruigrok, T.

in 2013

1105. Cerebellar nuclei and the inferior olivary nuclei: Organizations and connections. In M. Manto, J. Gruol, N. Schmahmann, N. Koibuchi & F. Rossi (Eds.), Handbook of the cerebellum and cerebellar disorders

Voogd, J., Shinoda, Y., Ruigrok, T., & Sugihara, I.

in 2013

1106. Oikonomos-II: A Reinforcement-Learning, Resource-Recommendation System for Cloud HPC.

Jan-Harm L. F. Betting, Chris I. De Zeeuw, Christos Strydis

in 2023

DOI: 10.1109/HIPC58850.2023.00044

1107. Joint Estimation of Hemodynamic Response and Stimulus Function in Functional Ultrasound Using Convolutive Mixtures.

Aybüke Erol, Simon Van Eyndhoven, Sebastiaan Koekkoek, Pieter Kruizinga, Borbála Hunyadi

in 2020

DOI: 10.1109/IEEECONF51394.2020.9443299

1108. Memristor-Based Lightweight Encryption.

Muhammad Ali Siddiqi, Jan Andrés Galvan Hernández, Anteneh Gebreziorgis, Rajendra Bishnoi, Christos Strydis, Said Hamdioui, Mottaqiallah Taouil

in 2023

DOI: 10.1109/DSD60849.2023.00092

1109. Stairway to Abstraction - an Iterative Algorithm for Whisker Detection in Video Frames.

Jan-Harm L. F. Betting, Vincenzo Romano, Laurens W. J. Bosman, Zaid Al-Ars, Chris I. De Zeeuw, Christos Strydis

in 2020 IEEE 11th Latin American Symposium on Circuits Systems (LASCAS) 2020

DOI: 10.1109/LASCAS45839.2020.9068992

1110. A Reconfigurable Architecture of a Scalable, Ultrafast, Ultrasound, Delay-and-Sum Beamformer.

Vasilis Kypriotis, Georgios Smaragdos, Pieter Kruizinga, Dimitrios Soudris, Christos Strydis

in 2024

DOI: 10.1109/IPDPSW63119.2024.00050

1111. On the role of attentional inhibition and memory during visual search.

Ignace Th. C. Hooge, Michiel J. Stapelkamp, Eelco A. B. Over, Björn N. S. Vlaskamp, Maarten A. Frens

in 2004

DOI: 10.1109/ICSMC.2004.1400014

1112. Towards real-time whisker tracking in rodents for studying sensorimotor disorders.

Yang Ma, Prajith Ramakrishnan Geethakumari, Georgios Smaragdos, Sander Lindeman, Vincenzo Romano, Mario Negrello, Ioannis Sourdis, Laurens W. J. Bosman, Chris I. De Zeeuw, Zaid Al-Ars, Christos Strydis

in 17th International Conference on Embedded Computer Systems: Architectures, Modeling, and Simulation, SAMOS 2017

DOI: 10.1109/SAMOS.2017.8344621

1113. First impressions from detailed brain model simulations on a Xeon/Xeon-Phi node.

George Chatzikonstantis, Dimitrios Rodopoulos, Sofia Nomikou, Christos Strydis, Chris I. De Zeeuw, Dimitrios Soudris

in Proceedings of the ACM International Conference on Computing Frontiers 2016

DOI: 10.1145/2903150.2903477

1114. Performance analysis of accelerated biophysically-meaningful neuron simulations.

Georgios Smaragdos, Georgios Chatzikonstantis, Sofia Nomikou, Dimitrios Rodopoulos, Ioannis Sourdis, Dimitrios Soudris, Chris I. De Zeeuw, Christos Strydis

in IEEE International Symposium on Performance Analysis of Systems and Software (ISPASS) 2016

DOI: 10.1109/ISPASS.2016.7482069

1115. On Using a Von Neumann Extractor in Heart-Beat-Based Security.

Robert Mark Seepers, Christos Strydis, Ioannis Sourdis, Chris Innocentius De Zeeuw

in IEEE Trustcom/BigDataSE/ISPA 2015

DOI: 10.1109/TRUSTCOM.2015.411

1116. An implementation of a wavelet-based seizure detection filter suitable for realtime closed-loop epileptic seizure suppression.

Marijn N. van Dongen, Athanasios Karapatis, L. Kros, O. H. J. Eelkman Rooda, Robert M. Seepers, Christos Strydis, Chris Innocentius De Zeeuw, F. E. Hoebeek, Wouter A. Serdijn

in IEEE Biomedical Circuits and Systems Conference (BioCAS) Proceedings 2014

DOI: 10.1109/BIOCAS.2014.6981773

1117. Towards realistic battery-DoS protection of implantable medical devices.

Muhammad Ali Siddiqi, Christos Strydis

in Proceedings of the 16th ACM International Conference on Computing Frontiers 2019

DOI: 10.1145/3310273.3321555 PDF

1118. Peak misdetection in heart-beat-based security - Characterization and tolerance.

Robert M. Seepers, Christos Strydis, Pedro Peris-Lopez, Ioannis Sourdis, Chris I. De Zeeuw

in 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society 2014

DOI: 10.1109/EMBC.2014.6944847

1119. IMD security vs. energy - are we tilting at windmills? - POSTER.

Muhammad Ali Siddiqi, Christos Strydis

in Proceedings of the 16th ACM International Conference on Computing Frontiers 2019

DOI: 10.1145/3310273.3323421 PDF

1120. Adaptive entity-identifier generation for IMD emergency access.

Robert M. Seepers, Christos Strydis, Ioannis Sourdis, Chris I. De Zeeuw

in Proceedings of the First Workshop on Cryptography and Security in Computing Systems 2014

DOI: 10.1145/2556315.2556324

Publications Directory

Preprint

1081. Neurons of the inferior olive respond to broad classes of sensory input while subject to homeostatic control

1082. Potentiation of cerebellar Purkinje cells facilitates whisker reflex adaptation through increased simple spike activity

1083. Neurometric correlates of sensitive high-frequency sound amplitude modulation detection by mice

1084. NeuroGym: An open resource for developing and sharing neuroscience tasks

Books

1085. The calyx of Held synapse. In: Synaptic mechanisms in the auditory system

1086. Cerebellum and cerebellar connections. The Rat Nervous System.

1087. Sensorimotor control of standing balance

1088. Measuring Cerebellar Processing and Sensorimotor Functions in Non-Human Primates

1089. Questioning the Cerebellar Doctrine

Conferences

1090. A potential role for the cerebellar nuclei in absence seizures

1091. Towards on-demand system reliability: software implemented fault tolerance and testing

1092. Attack-tree-based Threat Modeling of Medical Implants

1093. Towards High-Resolution functional Ultrasound (fUS) Imaging of the Murine Spinal Cord

1094. High Frequency Functional Ultrasound in Mice

1095. Efficient and Flexible Spatiotemporal Clutter Filtering of High Frame Rate Images Using Subspace Tracking

1096. GPU Implementation of Neural-Network Simulations based on Adaptive-Exponential Models

1097. Improving the Simulation of Biologically Accurate Neural Networks Using Data Flow HLS Transformations on Heterogeneous SoC-FPGA Platforms

1098. Accelerating complex brain-model simulations

1099. Design techniques of future reliable SoCs

1100. A Novel Target for Neuromodulation in Spinal Cord Injury: Dorsal Root Ganglion-Stimulation Can Evoke Weight-Bearing Motor Responses in Patients with Chronic Motor Complete Spinal Cord Injury

Inbooks

1101. The Inferior Olive: All Ins and Outs, In Handbook of the Cerebellum and Cerebellar

1102. Gap Junctions and Neuronal Synchronization in the Olivocerebellar System, In Gap Junctions in the Brain: Physiological and Pathological Roles, edited by Ekrem Dere

1103. Cerebellum and Precerebellar Nuclei, In The Human Nervous System, edited by JK Mai, G Paxinos and eds

1104. Cerebellar influences on descending spinal motor systems. In M. Manto, J. Gruol, N. Schmahmann, N. Koibuchi & F. Rossi (Eds.), Handbook of the cerebellum and cerebellum disorders

1105. Cerebellar nuclei and the inferior olivary nuclei: Organizations and connections. In M. Manto, J. Gruol, N. Schmahmann, N. Koibuchi & F. Rossi (Eds.), Handbook of the cerebellum and cerebellar disorders

Inproceedings

1106. Oikonomos-II: A Reinforcement-Learning, Resource-Recommendation System for Cloud HPC.

1107. Joint Estimation of Hemodynamic Response and Stimulus Function in Functional Ultrasound Using Convolutive Mixtures.

1108. Memristor-Based Lightweight Encryption.

1109. Stairway to Abstraction - an Iterative Algorithm for Whisker Detection in Video Frames.

1110. A Reconfigurable Architecture of a Scalable, Ultrafast, Ultrasound, Delay-and-Sum Beamformer.

1111. On the role of attentional inhibition and memory during visual search.

1112. Towards real-time whisker tracking in rodents for studying sensorimotor disorders.

1113. First impressions from detailed brain model simulations on a Xeon/Xeon-Phi node.

1114. Performance analysis of accelerated biophysically-meaningful neuron simulations.

1115. On Using a Von Neumann Extractor in Heart-Beat-Based Security.

1116. An implementation of a wavelet-based seizure detection filter suitable for realtime closed-loop epileptic seizure suppression.

1117. Towards realistic battery-DoS protection of implantable medical devices.

1118. Peak misdetection in heart-beat-based security - Characterization and tolerance.

1119. IMD security vs. energy - are we tilting at windmills? - POSTER.

1120. Adaptive entity-identifier generation for IMD emergency access.

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