Publications - Department of Neuroscience

1001. Single subject and group whole-brain fMRI mapping of male genital sensation at 7 Tesla.

Luijten SPR, Groenendijk IM, Holstege JC, De Zeeuw CI, van der Zwaag W, Blok BFM

in Scientific reports 2020

DOI: 10.1038/s41598-020-58966-9

1002. Role of calcium/calmodulin-dependent kinase 2 in neurodevelopmental disorders.

Onori MP, van Woerden GM

in Brain research bulletin 2021

DOI: 10.1016/j.brainresbull.2021.03.014

1003. Beta-frequency sensory stimulation enhances gait rhythmicity through strengthened coupling between striatal networks and stepping movement

Sudiksha Sridhar, Eric Lowet, Howard J Gritton, Jennifer Freire, Chengqian Zhou, Florence Liang, Xue Han

in Nature Communications 2024

DOI: https://doi.org/10.1038/s41467-024-52664-0

1004. The Effects of Perioperative Music Interventions in Pediatric Surgery: A Systematic Review and Meta-Analysis of Randomized Controlled Trials

van der Heijden, M. J. E., S. Oliai Araghi, M. van Dijk, J. Jeekel and M. G. M. Hunink

in PLoS ONE 2015

DOI: 10.1371/journal.pone.0133608

1005. Long-term outcome of postpartum psychosis: a prospective clinical cohort study in 106 women.

Rommel AS, Molenaar NM, Gilden J, Kushner SA, Westerbeek NJ, Kamperman AM, Bergink V

in International journal of bipolar disorders 2021

DOI: 10.1186/s40345-021-00236-2

1006. Sleep deprivation directly following eyeblink-conditioning impairs memory consolidation.

De Zeeuw CI, Canto CB

in Neurobiology of learning and memory 2020

DOI: 10.1016/j.nlm.2020.107165

1007. Cerebellar encoding of prior knowledge of temporal statistics

Koppen, J., Bayones, L., Klinkhamer, I., Runge, M., & Narain, D.

in 2024

DOI: https://doi.org/10.1101/2024.08.19.608550

1008. Fast implicit and slow explicit learning of temporal context in cortico-cerebellar loops

Mangili, L.*, Wissing, C.*, & Narain, D.

in 2024

DOI: https://doi.org/10.1101/2024.08.19.608568

1009. Neurons of the inferior olive respond to broad classes of sensory input while subject to homeostatic control

Ju C, Bosman LW, Hoogland TM, Velauthapillai A, Murugesan P, Warnaar P, Negrello M, De Zeeuw CI

in 2018

DOI: 10.1101/379149

1010. Potentiation of cerebellar Purkinje cells facilitates whisker reflex adaptation through increased simple spike activity

Romano V, De Propris L, Bosman LW, Warnaar P, ten Brinke MM, Lindeman S, Ju C, Velauthapillai A, Spanke J, Guerra EM, Hoogland TM, Negrello M, D'Angelo E, De Zeeuw CI

in 2018

DOI: 10.1101/335489

1011. Neurometric correlates of sensitive high-frequency sound amplitude modulation detection by mice

van den Berg MM, Busscher E, Borst JGG and Wong AB

in 2021

DOI: https://doi.org/10.1101/2021.11.02.466979

1012. NeuroGym: An open resource for developing and sharing neuroscience tasks

Manuel Molano-Mazon, Joao Barbosa, Jordi Pastor-Ciurana, Marta Fradera, Ru-yuan Zhang, Jeremy Forest, Jorge del Pozo Lerida, Li Ji-An, Christopher J Cueva, Jaime de la Rocha, Devika Narain, Guangyu Robert Yang

in 2021

DOI: 10.31234/osf.io/aqc9n

1013. The calyx of Held synapse. In: Synaptic mechanisms in the auditory system

Borst JGG, Rusu SI

in 2011

1014. Cerebellum and cerebellar connections. The Rat Nervous System.

Ruigrok T. J. H., Sillitoe E. V., Voogd J.

in 2015

1015. Sensorimotor control of standing balance

Forbes PA, Chen A, Blouin JS

in 2018

DOI: 10.1016/B978-0-444-63916-5.00004-5

1016. Measuring Cerebellar Processing and Sensorimotor Functions in Non-Human Primates

Nico A. Flierman, Eric Avila, Chris I. De Zeeuw, Aleksandra Badura

in 2022

DOI: 10.1007/978-1-0716-2026-7_14

1017. Questioning the Cerebellar Doctrine

Galliano, E. and De Zeeuw, C. I.

in 2014

DOI: 10.1016/B978-0-444-63356-9.00003-0

1018. A potential role for the cerebellar nuclei in absence seizures

Alva, P., Kros, L., Maex, R., De Zeeuw, C., Adams, R., Davey, N., Steuber, V., & Hoebeek, F.

in 22nd Annual Computational Neuroscience Meeting: CNS*2013. 2013

DOI: 10.1186/1471-2202-14-S1-P170

1019. Towards on-demand system reliability: software implemented fault tolerance and testing

Sourdis, I., Shafik, R. A., Strydis, C., Pnevmatikatos, D., Theodoropoulos, D., Pradhan, D. K., & Rauwerda, G.

in ETS Avignon 2013

1020. Attack-tree-based Threat Modeling of Medical Implants

Muhammad Ali Siddiqi, Robert M. Seepers, Mohammad Hamad, Vassilis Prevelakis and Christos Strydis

in PROOFS 2018. 7th International Workshop on Security Proofs for Embedded Systems 2018

DOI: https://doi.org/10.29007/8gxh PDF

1021. Towards High-Resolution functional Ultrasound (fUS) Imaging of the Murine Spinal Cord

Soloukey S., Harhangi B.S., Generowicz, B. S., Slenter J.P.H., de Zeeuw, C. I., Kruizinga P., Koekkoek, S. K. E.

in International Ultrasonics Symposium (IUS), IEEE 2019

DOI: 10.1109/ULTSYM.2019.8926243

1022. High Frequency Functional Ultrasound in Mice

S.K.E. Koekkoek , S. Soloukey Tbalvandany, B.S. Generowicz, W.S. van Hoogstraten, N.L. de Oude, H.J. Boele, C. Strydis, G. Leus, J.G. Bosch, A.F.W. van der Steen, C. I. de Zeeuw, and P. Kruizinga

in IEEE International Ultrasonics Symposium (IUS) 2018

DOI: 10.1109/ULTSYM.2018.8579865

1023. Efficient and Flexible Spatiotemporal Clutter Filtering of High Frame Rate Images Using Subspace Tracking

B.S. Generowicz, G. Leus , S. Soloukey Tbalvandany, W.S. Van Hoogstraten, C. Strydis, J.G. Bosch, A.F.W. Van Der Steen, C. I. de Zeeuw , S.K.E. Koekkoek, P. Kruizinga

in IEEE International Ultrasonics Symposium (IUS) 2018

DOI: 10.1109/ULTSYM.2018.8579775

1024. GPU Implementation of Neural-Network Simulations based on Adaptive-Exponential Models

A. Neofytou, G. Chatzikostantis, I Magkanaris, G. Smaragdos, C. Strydis, D. Soudris

in IEEE 19th International Conference on Bioinformatics and Bioengineering (BIBE) 2019

DOI: 10.1109/BIBE.2019.00067

1025. Improving the Simulation of Biologically Accurate Neural Networks Using Data Flow HLS Transformations on Heterogeneous SoC-FPGA Platforms

K. Alfaro-Badilla, A. Arroyo-Romero, C. Salazar-García, L.G.L. Vega, J. Espinoza-González, F. Hernández- Castro, A. Chacón-Rodríguez, G. Smaragdos, C. Strydis

in CARLA 2019: High Performance Computing 2019

DOI: 10.1007/978-3-030-41005-6_13

1026. Accelerating complex brain-model simulations

H.A. Du Nguyen, Z. Al-Ars, G. Smaragdos, C. Strydis

in Design, Automation & Test in Europe Conference & Exhibition (DATE) 2015

DOI: 10.7873/DATE.2015.0071

1027. Design techniques of future reliable SoCs

I. Sourdis and C. Strydis

in 2nd Mediterranean Conference on Embedded Computing (MECO) 2013

DOI: 10.1109/MECO.2013.6601392

1028. A Novel Target for Neuromodulation in Spinal Cord Injury: Dorsal Root Ganglion-Stimulation Can Evoke Weight-Bearing Motor Responses in Patients with Chronic Motor Complete Spinal Cord Injury

Sadaf Soloukey, Judith de Rooij, Rutger Osterthun, Judith Drenthen, Chris De Zeeuw, Frank Huygen, Biswadjiet Harhangi

in Journal of Neurosurgery Publishing Group (JNSPG) 2020

DOI: 10.3171/2020.4.JNS.AANS2020abstracts

1029. The Inferior Olive: All Ins and Outs, In Handbook of the Cerebellum and Cerebellar

De Gruijl, J. R., L. W. J. Bosman, C. De Zeeuw, and M. De Jeu

in 2012

1030. Gap Junctions and Neuronal Synchronization in the Olivocerebellar System, In Gap Junctions in the Brain: Physiological and Pathological Roles, edited by Ekrem Dere

Bazzigaluppi, P., S. C. Isenia, C. De Zeeuw, and M. De Jeu

in 2012

1031. Cerebellum and Precerebellar Nuclei, In The Human Nervous System, edited by JK Mai, G Paxinos and eds

Voogd, J., and TJH Ruigrok

in 2012,

1032. Cerebellar influences on descending spinal motor systems. In M. Manto, J. Gruol, N. Schmahmann, N. Koibuchi & F. Rossi (Eds.), Handbook of the cerebellum and cerebellum disorders

Ruigrok, T.

in 2013

1033. Cerebellar nuclei and the inferior olivary nuclei: Organizations and connections. In M. Manto, J. Gruol, N. Schmahmann, N. Koibuchi & F. Rossi (Eds.), Handbook of the cerebellum and cerebellar disorders

Voogd, J., Shinoda, Y., Ruigrok, T., & Sugihara, I.

in 2013

1034. Oikonomos-II: A Reinforcement-Learning, Resource-Recommendation System for Cloud HPC.

Jan-Harm L. F. Betting, Chris I. De Zeeuw, Christos Strydis

in 2023

DOI: 10.1109/HIPC58850.2023.00044

1035. Joint Estimation of Hemodynamic Response and Stimulus Function in Functional Ultrasound Using Convolutive Mixtures.

Aybüke Erol, Simon Van Eyndhoven, Sebastiaan Koekkoek, Pieter Kruizinga, Borbála Hunyadi

in 2020

DOI: 10.1109/IEEECONF51394.2020.9443299

1036. Memristor-Based Lightweight Encryption.

Muhammad Ali Siddiqi, Jan Andrés Galvan Hernández, Anteneh Gebreziorgis, Rajendra Bishnoi, Christos Strydis, Said Hamdioui, Mottaqiallah Taouil

in 2023

DOI: 10.1109/DSD60849.2023.00092

1037. Stairway to Abstraction - an Iterative Algorithm for Whisker Detection in Video Frames.

Jan-Harm L. F. Betting, Vincenzo Romano, Laurens W. J. Bosman, Zaid Al-Ars, Chris I. De Zeeuw, Christos Strydis

in 2020 IEEE 11th Latin American Symposium on Circuits Systems (LASCAS) 2020

DOI: 10.1109/LASCAS45839.2020.9068992

1038. A Reconfigurable Architecture of a Scalable, Ultrafast, Ultrasound, Delay-and-Sum Beamformer.

Vasilis Kypriotis, Georgios Smaragdos, Pieter Kruizinga, Dimitrios Soudris, Christos Strydis

in 2024

DOI: 10.1109/IPDPSW63119.2024.00050

1039. On the role of attentional inhibition and memory during visual search.

Ignace Th. C. Hooge, Michiel J. Stapelkamp, Eelco A. B. Over, Björn N. S. Vlaskamp, Maarten A. Frens

in 2004

DOI: 10.1109/ICSMC.2004.1400014

1040. Towards real-time whisker tracking in rodents for studying sensorimotor disorders.

Yang Ma, Prajith Ramakrishnan Geethakumari, Georgios Smaragdos, Sander Lindeman, Vincenzo Romano, Mario Negrello, Ioannis Sourdis, Laurens W. J. Bosman, Chris I. De Zeeuw, Zaid Al-Ars, Christos Strydis

in 17th International Conference on Embedded Computer Systems: Architectures, Modeling, and Simulation, SAMOS 2017

DOI: 10.1109/SAMOS.2017.8344621

Publications Directory

Articles

1001. Single subject and group whole-brain fMRI mapping of male genital sensation at 7 Tesla.

1002. Role of calcium/calmodulin-dependent kinase 2 in neurodevelopmental disorders.

1003. Beta-frequency sensory stimulation enhances gait rhythmicity through strengthened coupling between striatal networks and stepping movement

1004. The Effects of Perioperative Music Interventions in Pediatric Surgery: A Systematic Review and Meta-Analysis of Randomized Controlled Trials

1005. Long-term outcome of postpartum psychosis: a prospective clinical cohort study in 106 women.

1006. Sleep deprivation directly following eyeblink-conditioning impairs memory consolidation.

Preprint

1007. Cerebellar encoding of prior knowledge of temporal statistics

1008. Fast implicit and slow explicit learning of temporal context in cortico-cerebellar loops

1009. Neurons of the inferior olive respond to broad classes of sensory input while subject to homeostatic control

1010. Potentiation of cerebellar Purkinje cells facilitates whisker reflex adaptation through increased simple spike activity

1011. Neurometric correlates of sensitive high-frequency sound amplitude modulation detection by mice

1012. NeuroGym: An open resource for developing and sharing neuroscience tasks

Books

1013. The calyx of Held synapse. In: Synaptic mechanisms in the auditory system

1014. Cerebellum and cerebellar connections. The Rat Nervous System.

1015. Sensorimotor control of standing balance

1016. Measuring Cerebellar Processing and Sensorimotor Functions in Non-Human Primates

1017. Questioning the Cerebellar Doctrine

Conferences

1018. A potential role for the cerebellar nuclei in absence seizures

1019. Towards on-demand system reliability: software implemented fault tolerance and testing

1020. Attack-tree-based Threat Modeling of Medical Implants

1021. Towards High-Resolution functional Ultrasound (fUS) Imaging of the Murine Spinal Cord

1022. High Frequency Functional Ultrasound in Mice

1023. Efficient and Flexible Spatiotemporal Clutter Filtering of High Frame Rate Images Using Subspace Tracking

1024. GPU Implementation of Neural-Network Simulations based on Adaptive-Exponential Models

1025. Improving the Simulation of Biologically Accurate Neural Networks Using Data Flow HLS Transformations on Heterogeneous SoC-FPGA Platforms

1026. Accelerating complex brain-model simulations

1027. Design techniques of future reliable SoCs

1028. A Novel Target for Neuromodulation in Spinal Cord Injury: Dorsal Root Ganglion-Stimulation Can Evoke Weight-Bearing Motor Responses in Patients with Chronic Motor Complete Spinal Cord Injury

Inbooks

1029. The Inferior Olive: All Ins and Outs, In Handbook of the Cerebellum and Cerebellar

1030. Gap Junctions and Neuronal Synchronization in the Olivocerebellar System, In Gap Junctions in the Brain: Physiological and Pathological Roles, edited by Ekrem Dere

1031. Cerebellum and Precerebellar Nuclei, In The Human Nervous System, edited by JK Mai, G Paxinos and eds

1032. Cerebellar influences on descending spinal motor systems. In M. Manto, J. Gruol, N. Schmahmann, N. Koibuchi & F. Rossi (Eds.), Handbook of the cerebellum and cerebellum disorders

1033. Cerebellar nuclei and the inferior olivary nuclei: Organizations and connections. In M. Manto, J. Gruol, N. Schmahmann, N. Koibuchi & F. Rossi (Eds.), Handbook of the cerebellum and cerebellar disorders

Inproceedings

1034. Oikonomos-II: A Reinforcement-Learning, Resource-Recommendation System for Cloud HPC.

1035. Joint Estimation of Hemodynamic Response and Stimulus Function in Functional Ultrasound Using Convolutive Mixtures.

1036. Memristor-Based Lightweight Encryption.

1037. Stairway to Abstraction - an Iterative Algorithm for Whisker Detection in Video Frames.

1038. A Reconfigurable Architecture of a Scalable, Ultrafast, Ultrasound, Delay-and-Sum Beamformer.

1039. On the role of attentional inhibition and memory during visual search.

1040. Towards real-time whisker tracking in rodents for studying sensorimotor disorders.

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